生物信息学教研室
郑才尚

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个人简介:

郑才尚,研究员,博士生导师,现任中国医科大学生命科学学院生物信息学教研室主任。2016年毕业于中国科学院武汉病毒研究所,取得博士学位。先后在武汉病毒研究所和德克萨斯大学MD安德森癌症中心生物信息学系进行博士后训练。长期致力于肿瘤基因组与RNA功能研究,基于生物信息学与高通量实验技术融合的干-湿实验协同策略,聚焦肿瘤基因组中的非经典翻译事件及其产物——暗蛋白质组,以及非编码RNA与RNA结合蛋白的相互作用,深入揭示其在乳腺癌、结直肠癌、胶质母细胞瘤等高发难治性肿瘤发生与发展中的调控作用。

联系方式:cszheng@cmu.edu.cn

研究成果:

1.Caishang Zheng#,Yanjun Wei#, Peng Zhang, Kangyu Lin, Dandan He, Hongqi Teng, Ganiraju Manyam, Wen Liu, Hye Rin Lindsay Lee, Ximing Tang, Wei He, Nelufa Islam, Antrix Jain, Yulun Chiu, Shaolong Cao, Sherita Meyer-Gauen, Magnus Höök, Anna Malovannaya, Wenbo Li, Ming Hu, Wenyi Wang, Han Xu, Scott Kopetz and Yiwen Chen*. CRISPR-Cas9-based functional interrogation of unconventional translatome reveals human cancer dependency on cryptic non-canonical open reading frames.Nature Structural&Molecular biology, 2023, 30(12): 1878-1892.

2.Caishang Zheng#,Yanjun Wei#, Peng Zhang, Longyong Xu, Zhenzhen Zhang, Kangyu Lin, Jiakai Hou, Xiangdong Lv, Yao Ding, Antrix Jain, Nelufa Islam, Anna Malovannaya, Yun Wu, Feng Ding, Han Xu, Ming Sun*, Xi Chen, Yiwen Chen*. CRISPR/Cas9 screen uncovers functional translations of cryptic lncRNA-encoded ORFs in human cancer.Journal of Clinical Investigation, 2023, 133(5), e159940

3.Caishang Zheng#,Yanjun Wei#, Qiang Zhang#, Ming Sun*, Yunfei Wang, Jiakai Hou, Peng Zhang, Xiangdong Lv, Dan Su, Yujie Jiang, Joy Gumin, Nidhi Sahni, Baoli Hu, Wenyi Wang, Xi Chen, Daniel J. McGrail, Chaolin Zhang, Suyun Huang Han Xu, Junjie Chen, Frederick F. Lang, Jian Hu, and Yiwen Chen*. Multiomics analyses reveal DARS1-AS1/YBX1-controlled post-transcriptional circuits promoting glioblastoma tumorigenesis/radioresistance.Science Advances,2023, 9(31), eadf3984

4.Ming Sun#, Yunfei Wang#,Caishang Zheng#,Yanjun Wei, Jiakai Hou, Peng Zhang, Wei He, Xiangdong Lv, Yao Ding, Han Liang, Chung-Chau Hon, Xi Chen, Han Xu* and Yiwen Chen*. Systematic functional interrogation of human pseudogenes.Genome Biology, 2021, 12(1-29).

科研项目:

1. 国家自然科学基金面上项目1项

2. 辽宁省科技厅助力中国医科大学高质量发展专项1项